Temporal segmentation of animal trajectories informed
نویسندگان
چکیده
Most animals live in seasonal environments and experience very different conditions throughout the year. Behavioral strategies like migration, hibernation, and a life cycle adapted to the local seasonality help to cope with fluctuations in environmental conditions. Thus, how an individual utilizes the environment depends both on the current availability of habitat and the behavioral prerequisites of the individual at that time. While the increasing availability and richness of animal movement data has facilitated the development of algorithms that classify behavior by movement geometry, changes in the environmental correlates of animal movement have so far not been exploited for a behavioral annotation. Here, we suggest a method that uses these changes in individual–environment associations to divide animal location data into segments of higher ecological coherence, which we term niche segmentation. We use time series of random forest models to evaluate the transferability of habitat use over time to cluster observational data accordingly. We show that our method is able to identify relevant changes in habitat use corresponding to both changes in the availability of habitat and how it was used using simulated data, and apply our method to a tracking data set of common teal (Anas crecca). The niche segmentation proved to be robust, and segmented habitat suitability outperformed models neglecting the temporal dynamics of habitat use. Overall, we show that it is possible to classify animal trajectories based on changes of habitat use similar to geometric segmentation algorithms. We conclude that such an environmentally informed classification of animal trajectories can provide new insights into an individuals’ behavior and enables us to make sensible predictions of how suitable areas might be connected by movement in space and time.
منابع مشابه
APT: Action localization proposals from dense trajectories
This paper is on action localization in video with the aid of spatio-temporal proposals. To alleviate the computational expensive segmentation step of existing proposals, we propose bypassing the segmentations completely by generating proposals directly from the dense trajectories used to represent videos during classification. Our Action localization Proposals from dense Trajectories (APT) use...
متن کاملMultiple Target Tracking Using Spatio-Temporal Monte Carlo Markov Chain Data Association
We propose a framework for general multiple target tracking, where the input is a set of candidate regions in each frame, as obtained from a state of the art background learning, and the goal is to recover trajectories of targets over time from noisy observations. Due to occlusions by targets and static objects, noisy segmentation and false alarms, one foreground region may not correspond to on...
متن کاملExpectation-Maximization Binary Clustering for Behavioural Annotation
The growing capacity to process and store animal tracks has spurred the development of new methods to segment animal trajectories into elementary units of movement. Key challenges for movement trajectory segmentation are to (i) minimize the need of supervision, (ii) reduce computational costs, (iii) minimize the need of prior assumptions (e.g. simple parametrizations), and (iv) capture biologic...
متن کاملMotion estimation and segmentation in depth and intensity videos
This paper investigates motion estimation and segmentation of independently moving objects in video sequences that contain depth and intensity information, such as videos captured by a Time of Flight camera. Specifically, we present a motion estimation algorithm which is based on integration of depth and intensity data. The resulting motion information is used to derive long-term point trajecto...
متن کاملNumerical and Synoptic Study of Emission, Transport and Identify Potential Sources of a Severe Dust Storm Over Middle East
One of the powerful tools in dust storms analysis that have recently found extensive application is atmospheric-chemistry numerical modeling. Spatial and temporal distribution of Middle Eastern dust for a severe dust event during 4-8 July 2009 was analyzed by Weather Research and Forecasting with Chemistry (WRF/Chem) model simulations and remote sensing observations. The HYSPLIT model is applie...
متن کامل